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Digestate

What Happens to Nitrogen in Slurry During Anaerobic Digestion?

Nitrogen is the nutrient digestion changes most. Here's what actually happens to it, in plain terms, and what that means for storage and spreading.

6 min read · Reviewed September 2026

Biolectric container and digester connected up during installation

Quick Answer

Anaerobic digestion does not remove most of the nitrogen from slurry. Organic nitrogen can be converted into forms that are more readily plant available, particularly ammonium nitrogen. This can increase agronomic usefulness, but also means storage and application need careful management to reduce losses.

Key Points

  • Most of slurry's nitrogen stays in the system through digestion — it isn't removed
  • Organic nitrogen converts partly into ammonium nitrogen, a more plant-available form
  • That same availability makes nitrogen more prone to loss if handled poorly
  • Storage and spreading practice matter more, not less, once nitrogen is more available

Nitrogen in raw slurry

Untreated slurry contains nitrogen in a mix of forms, much of it bound up in organic material that needs further breakdown before plants can take it up. This organic nitrogen is a genuine nutrient resource, but it releases relatively slowly compared with a form crops can use immediately.

What digestion does to that nitrogen

As microorganisms break down organic material during digestion, some of the organic nitrogen converts into ammonium nitrogen — a form that's much more readily available to growing crops. Digestion doesn't create new nitrogen or remove the nitrogen that was there; it changes the form a portion of it is in.

Why ammonium nitrogen matters agronomically

Because ammonium nitrogen is more readily plant available, digestate can act more like a responsive nitrogen fertiliser than untreated slurry, particularly when applied during periods of active crop growth. This is one of the genuine agronomic advantages of digestion, alongside its role in energy generation.

The trade-off: ammonia losses

The same property that makes ammonium nitrogen useful to crops also makes it more prone to loss as ammonia gas, particularly if digestate is left on the surface rather than incorporated promptly, or applied in warm, windy conditions. This is a genuine management consideration, not a reason to avoid digestate — it just means application technique and timing matter more than they might with a slower-release material.

Storage and spreading, with nitrogen in mind

Covered storage reduces nitrogen loss before digestate is even applied, and low-emission spreading methods — such as trailing shoe or injection rather than splash-plate application — reduce losses at the point of application. Timing spreading to match periods of active crop demand makes the most of the readily available nitrogen rather than losing it before the crop can use it.

Why testing supports better nutrient planning

Because the proportion of readily available nitrogen varies with feedstock and digester operation, testing the actual digestate a farm produces — rather than assuming a generic split between organic and ammonium nitrogen — gives a much more reliable basis for a nutrient management plan, in the same way it does for the phosphorus and potassium content covered in our guide on digestate's fertiliser value.

Frequently Asked Questions

Sources

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